Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB1Q9Y5F3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB1Q9Y5F3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB1Q9Y5F3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHB1Q9Y5F3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PCDHB1Q9Y5F3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB1Q9Y5F3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 KRT16P4-201ENST00000453883 522 ntBASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 AP003733.1-201ENST00000491725 852 ntBASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB1Q9Y5F3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 AC099336.1-202ENST00000602961 463 ntBASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 AL121912.1-201ENST00000603683 238 ntBASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 IGHV3-41-201ENST00000613121 348 ntBASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB1Q9Y5F3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 IGHGP-201ENST00000390555 1178 ntBASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AC090616.6-201ENST00000582640 721 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms