Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PPARGC1AQ9UBK2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.57■□□□□ 0.56
PPARGC1AQ9UBK2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PPARGC1AQ9UBK2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.57■□□□□ 0.56
PPARGC1AQ9UBK2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.57■□□□□ 0.56
PPARGC1AQ9UBK2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC008764.6-201ENST00000595909 2069 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC022898.2-201ENST00000616822 1312 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 FLJ13224-201ENST00000313737 1514 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 ATP5G2P1-201ENST00000433580 426 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AP002383.4-201ENST00000442518 975 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AL592071.1-201ENST00000611956 408 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 NPAP1P7-201ENST00000613027 823 ntBASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPARGC1AQ9UBK2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 AL353801.3-201ENST00000609898 542 ntBASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 AC124864.1-201ENST00000623408 392 ntBASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PPARGC1AQ9UBK2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PPARGC1AQ9UBK2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms