Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BLOC1S4Q9NUP1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 IGHV3-47-201ENST00000425060 335 ntBASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.77■□□□□ 0.76
BLOC1S4Q9NUP1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BLOC1S4Q9NUP1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
BLOC1S4Q9NUP1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BLOC1S4Q9NUP1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.77■□□□□ 0.75
BLOC1S4Q9NUP1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 LINC00265-3P-201ENST00000447588 903 ntBASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 AC092119.3-201ENST00000612618 583 ntBASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BLOC1S4Q9NUP1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.75■□□□□ 0.75
BLOC1S4Q9NUP1 AC139713.2-201ENST00000641328 2723 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms