Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 AC148477.6-201ENST00000623746 465 ntBASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 AC083906.6-201ENST00000641366 219 ntBASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 AC055733.4-201ENST00000638462 1354 ntBASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 HLA-DQB1-201ENST00000374943 1656 ntBASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CDC42SE1Q9NRR8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC9.09□□□□□ -0.96
CDC42SE1Q9NRR8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC9.09□□□□□ -0.96
CDC42SE1Q9NRR8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms