Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 NUS1P2-201ENST00000417358 873 ntBASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 SLC25A6P5-201ENST00000435663 894 ntBASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 DUTP2-201ENST00000519164 463 ntBASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF4Q9NR80 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 KRT16P4-201ENST00000453883 522 ntBASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF4Q9NR80 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
ARHGEF4Q9NR80 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF4Q9NR80 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms