Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 AC079602.3-201ENST00000623931 403 ntBASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 CROCCP1-201ENST00000426910 5675 ntBASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 AL355312.1-201ENST00000407115 2176 ntBASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.85■□□□□ 0.29
NEUROD4Q9HD90 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 DDX43P3-201ENST00000441064 443 ntBASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 AC009154.2-201ENST00000621177 724 ntBASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEUROD4Q9HD90 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEUROD4Q9HD90 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEUROD4Q9HD90 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NEUROD4Q9HD90 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEUROD4Q9HD90 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEUROD4Q9HD90 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEUROD4Q9HD90 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 HOMER2P1-201ENST00000455653 964 ntBASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 AC091076.1-201ENST00000610741 619 ntBASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEUROD4Q9HD90 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms