Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 IGHGP-201ENST00000390555 1178 ntBASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 AC124864.1-201ENST00000623408 392 ntBASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 OR6D1P-202ENST00000641007 5290 ntBASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1BQ9H9Y6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.64■□□□□ 0.42
POLR1BQ9H9Y6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
POLR1BQ9H9Y6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLR1BQ9H9Y6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLR1BQ9H9Y6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.64■□□□□ 0.42
POLR1BQ9H9Y6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 AKR1C7P-201ENST00000305623 895 ntBASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 MIR564-202ENST00000385049 94 ntBASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 PMS2P1-201ENST00000431037 1228 ntBASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 REXO1L6P-202ENST00000619970 1078 ntBASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR1BQ9H9Y6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR1BQ9H9Y6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms