Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC073592.5-201ENST00000624854 528 ntBASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AF228730.7-201ENST00000641842 219 ntBASIC19.19■□□□□ 0.66
NXF3Q9H4D5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AL049757.1-201ENST00000616842 1596 ntBASIC19.19■□□□□ 0.66
NXF3Q9H4D5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 OR7E14P-202ENST00000530490 1290 ntBASIC19.18■□□□□ 0.66
NXF3Q9H4D5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 AC073592.4-201ENST00000623827 446 ntBASIC19.18■□□□□ 0.66
NXF3Q9H4D5 AC116407.3-201ENST00000623905 1129 ntBASIC19.18■□□□□ 0.66
NXF3Q9H4D5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NXF3Q9H4D5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 SPDYE21P-201ENST00000413323 827 ntBASIC19.17■□□□□ 0.66
NXF3Q9H4D5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 AC019129.2-201ENST00000609837 1235 ntBASIC19.17■□□□□ 0.66
NXF3Q9H4D5 AC116407.2-201ENST00000613639 860 ntBASIC19.17■□□□□ 0.66
NXF3Q9H4D5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.17■□□□□ 0.66
NXF3Q9H4D5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AL353593.2-201ENST00000602529 1483 ntBASIC19.16■□□□□ 0.66
NXF3Q9H4D5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AC020763.4-201ENST00000623414 4170 ntBASIC19.16■□□□□ 0.66
NXF3Q9H4D5 FLJ13224-201ENST00000313737 1514 ntBASIC19.16■□□□□ 0.66
NXF3Q9H4D5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 BICD1-207ENST00000551848 1962 ntBASIC19.16■□□□□ 0.66
NXF3Q9H4D5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 AC132938.5-201ENST00000624980 1813 ntBASIC19.16■□□□□ 0.66
NXF3Q9H4D5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NXF3Q9H4D5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NXF3Q9H4D5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NXF3Q9H4D5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms