Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 FAM8A6P-201ENST00000407496 1135 ntBASIC16.43■□□□□ 0.22
TRIM2Q9C040 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM2Q9C040 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.43■□□□□ 0.22
TRIM2Q9C040 KRT18P65-201ENST00000439811 1286 ntBASIC16.43■□□□□ 0.22
TRIM2Q9C040 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM2Q9C040 AL441883.1-201ENST00000566170 1045 ntBASIC16.43■□□□□ 0.22
TRIM2Q9C040 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM2Q9C040 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM2Q9C040 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM2Q9C040 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TRIM2Q9C040 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 STARP1-201ENST00000397973 869 ntBASIC16.42■□□□□ 0.22
TRIM2Q9C040 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 TSPY5P-201ENST00000426936 936 ntBASIC16.42■□□□□ 0.22
TRIM2Q9C040 KRT18P48-201ENST00000434763 852 ntBASIC16.42■□□□□ 0.22
TRIM2Q9C040 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 AC011558.1-201ENST00000623459 338 ntBASIC16.42■□□□□ 0.22
TRIM2Q9C040 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM2Q9C040 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM2Q9C040 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 AC100803.2-201ENST00000562459 1963 ntBASIC16.41■□□□□ 0.22
TRIM2Q9C040 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 AC079602.3-201ENST00000623931 403 ntBASIC16.41■□□□□ 0.22
TRIM2Q9C040 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 OR6D1P-203ENST00000641209 4860 ntBASIC16.41■□□□□ 0.22
TRIM2Q9C040 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM2Q9C040 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM2Q9C040 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 HLA-F-220ENST00000434407 884 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms