Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 AC024909.3-201ENST00000611513 2257 ntBASIC16.79■□□□□ 0.28
NR1H4Q96RI1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 KRT18P16-201ENST00000510337 1294 ntBASIC16.79■□□□□ 0.28
NR1H4Q96RI1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
NR1H4Q96RI1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.79■□□□□ 0.28
NR1H4Q96RI1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 LSM12P1-201ENST00000411836 588 ntBASIC16.78■□□□□ 0.28
NR1H4Q96RI1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H4Q96RI1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 HTR7P1-201ENST00000538670 1336 ntBASIC16.77■□□□□ 0.28
NR1H4Q96RI1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.77■□□□□ 0.28
NR1H4Q96RI1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H4Q96RI1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H4Q96RI1 AC093010.1-201ENST00000473625 1624 ntBASIC16.77■□□□□ 0.27
NR1H4Q96RI1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H4Q96RI1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H4Q96RI1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H4Q96RI1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms