Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 RPL13AP23-201ENST00000480739 586 ntBASIC18.81■□□□□ 0.6
SUSD3Q96L08 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 AC105339.3-201ENST00000560043 636 ntBASIC18.81■□□□□ 0.6
SUSD3Q96L08 AC109462.3-201ENST00000573934 613 ntBASIC18.81■□□□□ 0.6
SUSD3Q96L08 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUSD3Q96L08 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
SUSD3Q96L08 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUSD3Q96L08 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 AC138028.4-201ENST00000564984 1845 ntBASIC18.8■□□□□ 0.6
SUSD3Q96L08 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUSD3Q96L08 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.8■□□□□ 0.6
SUSD3Q96L08 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 AC003669.1-201ENST00000334569 611 ntBASIC18.79■□□□□ 0.6
SUSD3Q96L08 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 KLF4P1-201ENST00000412782 1185 ntBASIC18.79■□□□□ 0.6
SUSD3Q96L08 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 AC092910.1-201ENST00000482027 1129 ntBASIC18.79■□□□□ 0.6
SUSD3Q96L08 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 AC145285.3-201ENST00000564603 959 ntBASIC18.79■□□□□ 0.6
SUSD3Q96L08 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SUSD3Q96L08 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 BICD1-207ENST00000551848 1962 ntBASIC18.79■□□□□ 0.6
SUSD3Q96L08 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SUSD3Q96L08 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 AC098831.1-202ENST00000438821 336 ntBASIC18.78■□□□□ 0.6
SUSD3Q96L08 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.78■□□□□ 0.6
SUSD3Q96L08 ABALON-201ENST00000629058 1903 ntBASIC18.78■□□□□ 0.6
SUSD3Q96L08 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SUSD3Q96L08 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms