Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AC023141.5-201ENST00000458585 616 ntBASIC17.68■□□□□ 0.42
CLDN23Q96B33 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 MIR4745-201ENST00000577608 62 ntBASIC17.68■□□□□ 0.42
CLDN23Q96B33 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AC015911.4-201ENST00000588022 1070 ntBASIC17.68■□□□□ 0.42
CLDN23Q96B33 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AC068137.2-201ENST00000605408 478 ntBASIC17.68■□□□□ 0.42
CLDN23Q96B33 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN23Q96B33 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN23Q96B33 AC097637.2-201ENST00000624096 1997 ntBASIC17.68■□□□□ 0.42
CLDN23Q96B33 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 AC005332.7-201ENST00000614046 2005 ntBASIC17.67■□□□□ 0.42
CLDN23Q96B33 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.67■□□□□ 0.42
CLDN23Q96B33 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 CXCL1P1-201ENST00000502804 216 ntBASIC17.67■□□□□ 0.42
CLDN23Q96B33 STK19B-204ENST00000512515 211 ntBASIC17.67■□□□□ 0.42
CLDN23Q96B33 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 AC109462.3-201ENST00000573934 613 ntBASIC17.67■□□□□ 0.42
CLDN23Q96B33 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN23Q96B33 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN23Q96B33 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 PHGDH-209ENST00000641074 1780 ntBASIC17.66■□□□□ 0.42
CLDN23Q96B33 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 LINC00628-201ENST00000628516 1289 ntBASIC17.66■□□□□ 0.42
CLDN23Q96B33 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN23Q96B33 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN23Q96B33 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN23Q96B33 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN23Q96B33 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN23Q96B33 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN23Q96B33 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN23Q96B33 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN23Q96B33 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN23Q96B33 LINC00982-205ENST00000420957 435 ntBASIC17.65■□□□□ 0.42
CLDN23Q96B33 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.65■□□□□ 0.42
CLDN23Q96B33 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms