Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLNQ969V3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NCLNQ969V3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLNQ969V3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 AL096828.2-201ENST00000567259 1965 ntBASIC17.32■□□□□ 0.36
NCLNQ969V3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCLNQ969V3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 HOMER2P1-201ENST00000455653 964 ntBASIC17.32■□□□□ 0.36
NCLNQ969V3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
NCLNQ969V3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NCLNQ969V3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLNQ969V3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCLNQ969V3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLNQ969V3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.31■□□□□ 0.36
NCLNQ969V3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.31■□□□□ 0.36
NCLNQ969V3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.31■□□□□ 0.36
NCLNQ969V3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NCLNQ969V3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.31■□□□□ 0.36
NCLNQ969V3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.31■□□□□ 0.36
NCLNQ969V3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
NCLNQ969V3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLNQ969V3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLNQ969V3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLNQ969V3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCLNQ969V3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLNQ969V3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.3■□□□□ 0.36
NCLNQ969V3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NCLNQ969V3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLNQ969V3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NCLNQ969V3 ARMC10P1-201ENST00000313754 855 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms