Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RPGRQ92834 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
RPGRQ92834 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.85■■□□□ 1.09
RPGRQ92834 AC254562.1-201ENST00000417586 456 ntBASIC21.85■■□□□ 1.09
RPGRQ92834 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.85■■□□□ 1.09
RPGRQ92834 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.85■■□□□ 1.09
RPGRQ92834 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.85■■□□□ 1.09
RPGRQ92834 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.85■■□□□ 1.09
RPGRQ92834 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
RPGRQ92834 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPGRQ92834 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
RPGRQ92834 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.84■■□□□ 1.09
RPGRQ92834 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
RPGRQ92834 HTR5BP-201ENST00000430851 1154 ntBASIC21.84■■□□□ 1.09
RPGRQ92834 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.84■■□□□ 1.09
RPGRQ92834 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RPGRQ92834 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.84■■□□□ 1.09
RPGRQ92834 AL078644.1-201ENST00000609881 752 ntBASIC21.84■■□□□ 1.09
RPGRQ92834 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.84■■□□□ 1.09
RPGRQ92834 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.84■■□□□ 1.09
RPGRQ92834 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPGRQ92834 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.83■■□□□ 1.09
RPGRQ92834 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRQ92834 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRQ92834 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRQ92834 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRQ92834 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
RPGRQ92834 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.83■■□□□ 1.09
RPGRQ92834 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.83■■□□□ 1.09
RPGRQ92834 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.83■■□□□ 1.09
RPGRQ92834 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.83■■□□□ 1.08
RPGRQ92834 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 GPR89P-201ENST00000407924 1495 ntBASIC21.83■■□□□ 1.08
RPGRQ92834 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPGRQ92834 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRQ92834 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.82■■□□□ 1.08
RPGRQ92834 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.82■■□□□ 1.08
RPGRQ92834 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RPGRQ92834 AC109462.3-201ENST00000573934 613 ntBASIC21.82■■□□□ 1.08
RPGRQ92834 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.82■■□□□ 1.08
RPGRQ92834 AC019129.2-201ENST00000609837 1235 ntBASIC21.82■■□□□ 1.08
RPGRQ92834 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RPGRQ92834 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 AC073592.3-201ENST00000625118 1834 ntBASIC21.82■■□□□ 1.08
RPGRQ92834 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRQ92834 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
RPGRQ92834 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.82■■□□□ 1.08
RPGRQ92834 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.82■■□□□ 1.08
RPGRQ92834 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRQ92834 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RPGRQ92834 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRQ92834 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms