Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
C1orf54Q8WWF1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
C1orf54Q8WWF1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 HLA-J-201ENST00000462773 1622 ntBASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
C1orf54Q8WWF1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 GCSHP2-201ENST00000560971 527 ntBASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 AC084018.2-201ENST00000613093 2607 ntBASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
C1orf54Q8WWF1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1orf54Q8WWF1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms