Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 KRT8P50-201ENST00000562022 1438 ntBASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 LINC00554-201ENST00000564841 3011 ntBASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SMIM11BQ8TCY0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 LINC00304-203ENST00000565008 1864 ntBASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 AC060834.1-201ENST00000443027 2032 ntBASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 SDHAP2-201ENST00000455183 2001 ntBASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM11BQ8TCY0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.58□□□□□ -0.55
SMIM11BQ8TCY0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SMIM11BQ8TCY0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
SMIM11BQ8TCY0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.58□□□□□ -0.55
SMIM11BQ8TCY0 AC092368.3-202ENST00000574180 1591 ntBASIC11.58□□□□□ -0.55
SMIM11BQ8TCY0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.55
SMIM11BQ8TCY0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 MST1L-201ENST00000442552 2185 ntBASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 AC026691.1-201ENST00000602502 2017 ntBASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM11BQ8TCY0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms