Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 ADH5P3-201ENST00000433842 1137 ntBASIC26.45■■□□□ 1.82
AFAP1Q8N556 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC26.45■■□□□ 1.82
AFAP1Q8N556 AC068137.2-201ENST00000605408 478 ntBASIC26.45■■□□□ 1.82
AFAP1Q8N556 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
AFAP1Q8N556 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
AFAP1Q8N556 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.45■■□□□ 1.82
AFAP1Q8N556 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.45■■□□□ 1.82
AFAP1Q8N556 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
AFAP1Q8N556 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 AC100803.2-201ENST00000562459 1963 ntBASIC26.44■■□□□ 1.82
AFAP1Q8N556 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
AFAP1Q8N556 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
AFAP1Q8N556 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
AFAP1Q8N556 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 CXCL1P1-201ENST00000502804 216 ntBASIC26.44■■□□□ 1.82
AFAP1Q8N556 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 STK19B-204ENST00000512515 211 ntBASIC26.44■■□□□ 1.82
AFAP1Q8N556 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 AC006116.8-202ENST00000587620 1550 ntBASIC26.44■■□□□ 1.82
AFAP1Q8N556 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC26.44■■□□□ 1.82
AFAP1Q8N556 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 KLK8-202ENST00000320838 456 ntTSL 5 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 SLBP-205ENST00000488267 987 ntTSL 2 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC26.43■■□□□ 1.82
AFAP1Q8N556 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
AFAP1Q8N556 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 AC009336.1-201ENST00000608941 1553 ntBASIC26.42■■□□□ 1.82
AFAP1Q8N556 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 DUX4L27-201ENST00000554796 1261 ntBASIC26.42■■□□□ 1.82
AFAP1Q8N556 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
AFAP1Q8N556 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.42■■□□□ 1.82
AFAP1Q8N556 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
AFAP1Q8N556 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
AFAP1Q8N556 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
AFAP1Q8N556 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
AFAP1Q8N556 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
AFAP1Q8N556 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
AFAP1Q8N556 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.41■■□□□ 1.82
AFAP1Q8N556 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
AFAP1Q8N556 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.4■■□□□ 1.82
AFAP1Q8N556 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
AFAP1Q8N556 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
AFAP1Q8N556 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
AFAP1Q8N556 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms