Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 HBZP1-201ENST00000354915 429 ntBASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 AC092647.4-201ENST00000457211 535 ntBASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 AL359075.1-203ENST00000462729 1002 ntBASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL3Q8IVW4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 HLA-J-201ENST00000462773 1622 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 AC112907.2-201ENST00000448639 330 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 AC112698.1-201ENST00000510299 916 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 GPR32P1-201ENST00000601788 811 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 LINC01451-201ENST00000623792 534 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 AL138688.1-201ENST00000624851 1594 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 LTB4R2-202ENST00000528054 3092 ntBASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL3Q8IVW4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 AL353692.3-201ENST00000407031 1396 ntBASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDKL3Q8IVW4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms