Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 TUBB3P1-201ENST00000405796 1332 ntBASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.58■□□□□ 0.24
ZFHX4Q86UP3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 SIRPAP1-201ENST00000448467 1770 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 AL049757.1-201ENST00000616842 1596 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 CNN2P2-201ENST00000443536 909 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 CNN2P3-201ENST00000450201 906 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 AL136317.3-201ENST00000618497 906 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 RHOQP3-201ENST00000437982 621 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 AL121761.2-201ENST00000598007 1648 ntBASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZFHX4Q86UP3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 AL161938.1-201ENST00000569833 2180 ntBASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 SPDYE21P-201ENST00000413323 827 ntBASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 SPTLC1P1-201ENST00000447199 261 ntBASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 AL162274.1-201ENST00000617191 1098 ntBASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 KLF2P3-201ENST00000451977 1087 ntBASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZFHX4Q86UP3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 AC132938.5-201ENST00000624980 1813 ntBASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 AC125807.1-201ENST00000483097 614 ntBASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
ZFHX4Q86UP3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms