Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 SOX15-203ENST00000570788 1093 ntBASIC11.31□□□□□ -0.6
LINC00575Q6W349 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 LINC01451-201ENST00000623792 534 ntBASIC11.31□□□□□ -0.6
LINC00575Q6W349 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 FLJ16779-201ENST00000612722 7638 ntBASIC11.31□□□□□ -0.6
LINC00575Q6W349 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 BET1L-207ENST00000529614 560 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00575Q6W349 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00575Q6W349 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 MCCD1P1-208ENST00000445732 328 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms