Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM88Q6PEY1 AP002414.2-201ENST00000591780 3365 ntBASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 MCRIP2P1-201ENST00000394346 511 ntBASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 KRT18P6-201ENST00000555540 1265 ntBASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 AL031963.3-201ENST00000606441 850 ntBASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM88Q6PEY1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 CYP2T3P-201ENST00000601990 817 ntBASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 AC100791.3-201ENST00000617619 330 ntBASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 AC022188.1-201ENST00000620960 1664 ntBASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.42□□□□□ -0.1
TMEM88Q6PEY1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM88Q6PEY1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms