Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 DDX43P3-201ENST00000441064 443 ntBASIC22.27■■□□□ 1.16
RC3H1Q5TC82 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 CXCL1P1-201ENST00000502804 216 ntBASIC22.27■■□□□ 1.16
RC3H1Q5TC82 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 AC116407.2-201ENST00000613639 860 ntBASIC22.27■■□□□ 1.16
RC3H1Q5TC82 REXO1L3P-201ENST00000622202 1288 ntBASIC22.27■■□□□ 1.16
RC3H1Q5TC82 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.27■■□□□ 1.16
RC3H1Q5TC82 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H1Q5TC82 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RC3H1Q5TC82 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 AC004449.1-201ENST00000564240 433 ntBASIC22.26■■□□□ 1.15
RC3H1Q5TC82 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RC3H1Q5TC82 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 COX20P2-201ENST00000452636 358 ntBASIC22.25■■□□□ 1.15
RC3H1Q5TC82 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H1Q5TC82 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 AC002558.1-201ENST00000488906 803 ntBASIC22.24■■□□□ 1.15
RC3H1Q5TC82 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 AC068137.2-201ENST00000605408 478 ntBASIC22.24■■□□□ 1.15
RC3H1Q5TC82 AC093512.1-201ENST00000617969 520 ntBASIC22.24■■□□□ 1.15
RC3H1Q5TC82 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H1Q5TC82 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms