Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.33■□□□□ 0.37
SNAP47Q5SQN1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 SLC25A6P4-201ENST00000586535 553 ntBASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 AC114341.1-201ENST00000618070 349 ntBASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNAP47Q5SQN1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNAP47Q5SQN1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 AL662844.1-201ENST00000546340 181 ntBASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.31■□□□□ 0.36
SNAP47Q5SQN1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms