Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 UPF3AP3-201ENST00000420996 769 ntBASIC20.69■□□□□ 0.9
IRX3P78415 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.69■□□□□ 0.9
IRX3P78415 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 AC010327.4-202ENST00000591484 748 ntBASIC20.69■□□□□ 0.9
IRX3P78415 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.69■□□□□ 0.9
IRX3P78415 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
IRX3P78415 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
IRX3P78415 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 BX005266.1-201ENST00000473402 457 ntBASIC20.68■□□□□ 0.9
IRX3P78415 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.68■□□□□ 0.9
IRX3P78415 UNC93B6-202ENST00000528242 690 ntBASIC20.68■□□□□ 0.9
IRX3P78415 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
IRX3P78415 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.68■□□□□ 0.9
IRX3P78415 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.68■□□□□ 0.9
IRX3P78415 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.68■□□□□ 0.9
IRX3P78415 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
IRX3P78415 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.68■□□□□ 0.9
IRX3P78415 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.68■□□□□ 0.9
IRX3P78415 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
IRX3P78415 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.68■□□□□ 0.9
IRX3P78415 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
IRX3P78415 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
IRX3P78415 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX3P78415 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 ANO7L1-203ENST00000602586 1720 ntBASIC20.67■□□□□ 0.9
IRX3P78415 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.67■□□□□ 0.9
IRX3P78415 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.67■□□□□ 0.9
IRX3P78415 RNA5SP416-201ENST00000516838 111 ntBASIC20.67■□□□□ 0.9
IRX3P78415 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.67■□□□□ 0.9
IRX3P78415 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.67■□□□□ 0.9
IRX3P78415 AC055717.3-201ENST00000622967 595 ntBASIC20.67■□□□□ 0.9
IRX3P78415 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.67■□□□□ 0.9
IRX3P78415 AC097374.2-201ENST00000618617 1306 ntBASIC20.67■□□□□ 0.9
IRX3P78415 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX3P78415 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX3P78415 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.67■□□□□ 0.9
IRX3P78415 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 AC004408.2-201ENST00000623613 2777 ntBASIC20.67■□□□□ 0.9
IRX3P78415 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX3P78415 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
IRX3P78415 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX3P78415 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX3P78415 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
IRX3P78415 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
IRX3P78415 AC116562.4-201ENST00000641316 2276 ntBASIC20.66■□□□□ 0.9
IRX3P78415 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.66■□□□□ 0.9
IRX3P78415 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.66■□□□□ 0.9
IRX3P78415 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.66■□□□□ 0.9
IRX3P78415 AC040169.1-201ENST00000565382 521 ntBASIC20.66■□□□□ 0.9
IRX3P78415 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.66■□□□□ 0.9
IRX3P78415 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.66■□□□□ 0.9
IRX3P78415 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.66■□□□□ 0.9
IRX3P78415 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX3P78415 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms