Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HIST1H3AP68431 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.58■□□□□ 0.08
HIST1H3AP68431 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
HIST1H3AP68431 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H3AP68431 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 HLA-J-201ENST00000462773 1622 ntBASIC15.57■□□□□ 0.08
HIST1H3AP68431 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AC096633.1-201ENST00000422446 749 ntBASIC15.57■□□□□ 0.08
HIST1H3AP68431 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AL353801.3-201ENST00000609898 542 ntBASIC15.57■□□□□ 0.08
HIST1H3AP68431 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AC097374.2-201ENST00000618617 1306 ntBASIC15.57■□□□□ 0.08
HIST1H3AP68431 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AL138688.1-201ENST00000624851 1594 ntBASIC15.57■□□□□ 0.08
HIST1H3AP68431 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H3AP68431 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
HIST1H3AP68431 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 AL031133.1-201ENST00000406807 723 ntBASIC15.56■□□□□ 0.08
HIST1H3AP68431 RN7SL606P-201ENST00000472779 293 ntBASIC15.56■□□□□ 0.08
HIST1H3AP68431 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HIST1H3AP68431 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H3AP68431 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 BX276092.7-203ENST00000637198 1536 ntBASIC15.55■□□□□ 0.08
HIST1H3AP68431 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms