Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGA2P52926 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HMGA2P52926 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.25■□□□□ 0.19
HMGA2P52926 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HMGA2P52926 BX276092.7-203ENST00000637198 1536 ntBASIC16.25■□□□□ 0.19
HMGA2P52926 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HMGA2P52926 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGA2P52926 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.25■□□□□ 0.19
HMGA2P52926 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGA2P52926 AL157888.1-201ENST00000631930 593 ntBASIC16.25■□□□□ 0.19
HMGA2P52926 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGA2P52926 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGA2P52926 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HMGA2P52926 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGA2P52926 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
HMGA2P52926 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGA2P52926 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGA2P52926 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGA2P52926 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGA2P52926 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMGA2P52926 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HMGA2P52926 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
HMGA2P52926 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGA2P52926 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMGA2P52926 HCG11-201ENST00000411553 5696 ntBASIC16.24■□□□□ 0.19
HMGA2P52926 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGA2P52926 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMGA2P52926 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
HMGA2P52926 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.24■□□□□ 0.19
HMGA2P52926 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.24■□□□□ 0.19
HMGA2P52926 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.24■□□□□ 0.19
HMGA2P52926 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGA2P52926 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGA2P52926 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HMGA2P52926 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HMGA2P52926 LINC01311-201ENST00000565162 1445 ntBASIC16.24■□□□□ 0.19
HMGA2P52926 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGA2P52926 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HMGA2P52926 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGA2P52926 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGA2P52926 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.23■□□□□ 0.19
HMGA2P52926 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMGA2P52926 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HMGA2P52926 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HMGA2P52926 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGA2P52926 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGA2P52926 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
HMGA2P52926 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGA2P52926 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGA2P52926 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGA2P52926 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGA2P52926 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
HMGA2P52926 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms