Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.43■□□□□ 0.7
USP8P40818 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP8P40818 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP8P40818 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
USP8P40818 SIRPAP1-201ENST00000448467 1770 ntBASIC19.43■□□□□ 0.7
USP8P40818 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
USP8P40818 SPDYE15P-201ENST00000424157 909 ntBASIC19.43■□□□□ 0.7
USP8P40818 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.43■□□□□ 0.7
USP8P40818 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.43■□□□□ 0.7
USP8P40818 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.43■□□□□ 0.7
USP8P40818 AC079602.3-201ENST00000623931 403 ntBASIC19.43■□□□□ 0.7
USP8P40818 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP8P40818 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
USP8P40818 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 LINC00602-201ENST00000629776 2065 ntBASIC19.42■□□□□ 0.7
USP8P40818 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP8P40818 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.42■□□□□ 0.7
USP8P40818 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.42■□□□□ 0.7
USP8P40818 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 AK4P3-201ENST00000418260 669 ntBASIC19.42■□□□□ 0.7
USP8P40818 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP8P40818 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 AL136038.4-201ENST00000603606 1261 ntBASIC19.42■□□□□ 0.7
USP8P40818 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.42■□□□□ 0.7
USP8P40818 AL391807.1-203ENST00000604392 2365 ntBASIC19.42■□□□□ 0.7
USP8P40818 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP8P40818 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
USP8P40818 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP8P40818 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.42■□□□□ 0.7
USP8P40818 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 AC012317.2-201ENST00000623305 2251 ntBASIC19.41■□□□□ 0.7
USP8P40818 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 PKD1P5-201ENST00000532415 10291 ntBASIC19.41■□□□□ 0.7
USP8P40818 AC132938.6-201ENST00000623828 1655 ntBASIC19.41■□□□□ 0.7
USP8P40818 TSPY5P-201ENST00000426936 936 ntBASIC19.41■□□□□ 0.7
USP8P40818 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.41■□□□□ 0.7
USP8P40818 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP8P40818 AL359075.1-203ENST00000462729 1002 ntBASIC19.41■□□□□ 0.7
USP8P40818 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.41■□□□□ 0.7
USP8P40818 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.41■□□□□ 0.7
USP8P40818 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.41■□□□□ 0.7
USP8P40818 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms