Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NFE2L1-220ENST00000584634 588 ntTSL 417.61■□□□□ 0.413e-8■■■□□ 16.9
RPS3P23396 WDR26-208ENST00000486652 2867 ntTSL 1 (best)16.96■□□□□ 0.313e-6■■■□□ 16.9
RPS3P23396 SUPT6H-206ENST00000581510 1194 ntTSL 516.84■□□□□ 0.293e-6■■■□□ 16.9
RPS3P23396 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.275e-7■■■□□ 16.9
RPS3P23396 ARF5-206ENST00000489673 566 ntTSL 216.69■□□□□ 0.263e-6■■■□□ 16.9
RPS3P23396 MAEA-215ENST00000512289 2426 ntTSL 216.57■□□□□ 0.243e-6■■■□□ 16.9
RPS3P23396 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.213e-6■■■□□ 16.9
RPS3P23396 ARF5-204ENST00000463733 1509 ntTSL 516.26■□□□□ 0.193e-6■■■□□ 16.9
RPS3P23396 TCF25-203ENST00000561585 981 ntTSL 216.23■□□□□ 0.193e-6■■■□□ 16.9
RPS3P23396 ACADVL-225ENST00000581378 752 ntTSL 316.19■□□□□ 0.183e-6■■■□□ 16.9
RPS3P23396 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.163e-6■■■□□ 16.9
RPS3P23396 UBE2E1-211ENST00000495141 582 ntTSL 216■□□□□ 0.152e-11■■■□□ 16.9
RPS3P23396 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.97■□□□□ 0.153e-6■■■□□ 16.9
RPS3P23396 UBE2E1-204ENST00000442670 622 ntTSL 215.82■□□□□ 0.122e-11■■■□□ 16.9
RPS3P23396 TCF25-222ENST00000568412 797 ntTSL 315.75■□□□□ 0.113e-6■■■□□ 16.9
RPS3P23396 TCF25-204ENST00000561958 763 ntTSL 315.75■□□□□ 0.113e-6■■■□□ 16.9
RPS3P23396 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.113e-6■■■□□ 16.9
RPS3P23396 AP2A1-204ENST00000594838 611 ntTSL 315.7■□□□□ 0.13e-6■■■□□ 16.9
RPS3P23396 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.49■□□□□ 0.073e-6■■■□□ 16.9
RPS3P23396 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.49■□□□□ 0.073e-8■■■□□ 16.9
RPS3P23396 ACY1-221ENST00000637199 790 ntTSL 215.48■□□□□ 0.071e-6■■■□□ 16.9
RPS3P23396 MAEA-204ENST00000503162 2069 ntTSL 215.43■□□□□ 0.063e-6■■■□□ 16.9
RPS3P23396 TCF25-226ENST00000640279 2688 ntTSL 515.42■□□□□ 0.063e-6■■■□□ 16.9
RPS3P23396 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.053e-6■■■□□ 16.9
RPS3P23396 NFE2L1-217ENST00000583210 512 ntTSL 415.19■□□□□ 0.023e-8■■■□□ 16.9
RPS3P23396 PIH1D1-220ENST00000601053 634 ntTSL 515.11■□□□□ 0.013e-6■■■□□ 16.9
RPS3P23396 TCF25-214ENST00000565196 655 ntTSL 515.11■□□□□ 0.013e-6■■■□□ 16.9
RPS3P23396 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15□□□□□ -0.013e-6■■■□□ 16.9
RPS3P23396 MAEA-220ENST00000515766 3136 ntTSL 214.98□□□□□ -0.013e-6■■■□□ 16.9
RPS3P23396 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.13e-6■■■□□ 16.9
RPS3P23396 NFE2L1-210ENST00000580037 583 ntTSL 414.39□□□□□ -0.119e-8■■■□□ 16.9
RPS3P23396 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.123e-6■■■□□ 16.9
RPS3P23396 CYTH2-205ENST00000460595 1026 ntTSL 314.32□□□□□ -0.123e-6■■■□□ 16.9
RPS3P23396 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.173e-6■■■□□ 16.9
RPS3P23396 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.193e-6■■■□□ 16.9
RPS3P23396 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.86□□□□□ -0.193e-8■■■□□ 16.9
RPS3P23396 FBXO6-202ENST00000449067 928 ntTSL 313.74□□□□□ -0.213e-6■■■□□ 16.9
RPS3P23396 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.253e-6■■■□□ 16.9
RPS3P23396 DHX9-202ENST00000473076 1378 ntTSL 1 (best)13.34□□□□□ -0.271e-8■■■□□ 16.9
RPS3P23396 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.292e-6■■■□□ 16.9
RPS3P23396 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13□□□□□ -0.335e-7■■■□□ 16.9
RPS3P23396 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.343e-6■■■□□ 16.9
RPS3P23396 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.364e-8■■■□□ 16.9
RPS3P23396 MYADM-208ENST00000439000 841 ntTSL 312.81□□□□□ -0.361e-8■■■□□ 16.9
RPS3P23396 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.363e-6■■■□□ 16.9
RPS3P23396 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC12.47□□□□□ -0.416e-8■■■□□ 16.9
RPS3P23396 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-6■■■□□ 16.9
RPS3P23396 CYTH2-208ENST00000474049 576 ntTSL 212.39□□□□□ -0.433e-6■■■□□ 16.9
RPS3P23396 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.436e-8■■■□□ 16.9
RPS3P23396 MAEA-205ENST00000503653 845 ntTSL 312.04□□□□□ -0.485e-7■■■□□ 16.9
RPS3P23396 ARF5-202ENST00000415666 546 ntTSL 511.82□□□□□ -0.523e-6■■■□□ 16.9
RPS3P23396 CYTH2-210ENST00000493260 4652 ntTSL 511.71□□□□□ -0.543e-6■■■□□ 16.9
RPS3P23396 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC11.47□□□□□ -0.576e-8■■■□□ 16.9
RPS3P23396 AAMP-206ENST00000461911 567 ntTSL 211.28□□□□□ -0.62e-6■■■□□ 16.9
RPS3P23396 CLPX-204ENST00000559152 2228 ntTSL 1 (best)11.2□□□□□ -0.623e-6■■■□□ 16.9
RPS3P23396 WDR26-207ENST00000480676 1725 ntTSL 511.03□□□□□ -0.643e-6■■■□□ 16.9
RPS3P23396 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC10.98□□□□□ -0.653e-6■■■□□ 16.9
RPS3P23396 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC10.63□□□□□ -0.716e-8■■■□□ 16.9
RPS3P23396 USP19-204ENST00000398896 3907 ntAPPRIS ALT2 TSL 1 (best)10.58□□□□□ -0.723e-6■■■□□ 16.9
RPS3P23396 WDR26-205ENST00000479727 795 ntTSL 310.17□□□□□ -0.783e-6■■■□□ 16.9
RPS3P23396 ARF5-203ENST00000459680 466 ntTSL 1 (best)9.92□□□□□ -0.823e-6■■■□□ 16.9
RPS3P23396 STRAP-206ENST00000541731 1698 ntTSL 29.88□□□□□ -0.832e-6■■■□□ 16.9
RPS3P23396 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC9.69□□□□□ -0.862e-6■■■□□ 16.9
RPS3P23396 SMARCD1-206ENST00000549274 611 ntTSL 39.67□□□□□ -0.863e-6■■■□□ 16.9
RPS3P23396 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC9.67□□□□□ -0.863e-6■■■□□ 16.9
RPS3P23396 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC9.22□□□□□ -0.932e-11■■■□□ 16.9
RPS3P23396 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC9.22□□□□□ -0.932e-11■■■□□ 16.9
RPS3P23396 ACADVL-230ENST00000582379 833 ntTSL 39.03□□□□□ -0.963e-6■■■□□ 16.9
RPS3P23396 OS9-210ENST00000549307 3870 ntTSL 29□□□□□ -0.974e-7■■■□□ 16.9
RPS3P23396 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.973e-6■■■□□ 16.9
RPS3P23396 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -13e-6■■■□□ 16.9
RPS3P23396 SUPT6H-208ENST00000583340 581 ntTSL 38.34□□□□□ -1.073e-6■■■□□ 16.9
RPS3P23396 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.113e-6■■■□□ 16.9
RPS3P23396 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.04□□□□□ -1.123e-6■■■□□ 16.9
RPS3P23396 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.133e-6■■■□□ 16.9
RPS3P23396 SMARCD1-207ENST00000549526 401 ntTSL 57.68□□□□□ -1.183e-6■■■□□ 16.9
RPS3P23396 PDCD4-207ENST00000483595 531 ntTSL 56.58□□□□□ -1.363e-6■■■□□ 16.9
RPS3P23396 UBE2E1-205ENST00000452012 1166 ntTSL 36.14□□□□□ -1.432e-11■■■□□ 16.9
RPS3P23396 CLPX-206ENST00000560166 563 ntTSL 36.13□□□□□ -1.433e-6■■■□□ 16.9
RPS3P23396 PDCD4-211ENST00000498367 975 ntTSL 35.94□□□□□ -1.463e-6■■■□□ 16.9
RPS3P23396 UBE2E1-210ENST00000493707 857 ntTSL 35.89□□□□□ -1.472e-11■■■□□ 16.9
RPS3P23396 PDCD4-204ENST00000462577 789 ntTSL 55.08□□□□□ -1.63e-6■■■□□ 16.9
RPS3P23396 TKFC-211ENST00000529620 433 ntTSL 321.44■■□□□ 1.024e-8■■■□□ 16.9
RPS3P23396 CP-210ENST00000481169 3411 ntTSL 26.67□□□□□ -1.341e-7■■■□□ 16.9
RPS3P23396 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.681e-7■■■□□ 16.9
RPS3P23396 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.993e-8■■■□□ 16.9
RPS3P23396 MDH2-202ENST00000424167 681 ntTSL 211.89□□□□□ -0.512e-16■■■□□ 16.9
RPS3P23396 DERL1-204ENST00000519018 575 ntTSL 4 BASIC12.65□□□□□ -0.388e-15■■■□□ 16.9
RPS3P23396 DERL1-206ENST00000524119 5513 ntTSL 410.3□□□□□ -0.768e-15■■■□□ 16.9
RPS3P23396 DERL1-205ENST00000523036 542 ntTSL 4 BASIC9.98□□□□□ -0.818e-15■■■□□ 16.9
RPS3P23396 GGCX-206ENST00000465637 563 ntTSL 413.17□□□□□ -0.34e-7■■■□□ 16.9
RPS3P23396 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC9.77□□□□□ -0.854e-7■■■□□ 16.9
RPS3P23396 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.184e-7■■■□□ 16.9
RPS3P23396 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.781e-6■■■□□ 16.9
RPS3P23396 CAPZA1-206ENST00000498626 650 ntTSL 57.62□□□□□ -1.191e-6■■■□□ 16.9
RPS3P23396 CAPZA1-204ENST00000476936 867 ntTSL 35.04□□□□□ -1.61e-6■■■□□ 16.9
RPS3P23396 NARS-209ENST00000589001 612 ntTSL 24.23□□□□□ -1.733e-6■■■□□ 16.9
RPS3P23396 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.145e-8■■■□□ 16.9
RPS3P23396 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.075e-8■■■□□ 16.9
RPS3P23396 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.895e-8■■■□□ 16.9
Retrieved 100 of 24,271 protein–RNA pairs in 252.3 ms