Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN1P18031 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN1P18031 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.86■□□□□ 0.61
PTPN1P18031 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PTPN1P18031 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN1P18031 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.86■□□□□ 0.61
PTPN1P18031 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN1P18031 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN1P18031 REXO1L6P-202ENST00000619970 1078 ntBASIC18.86■□□□□ 0.61
PTPN1P18031 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPN1P18031 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPN1P18031 AL390961.4-201ENST00000623958 2535 ntBASIC18.85■□□□□ 0.61
PTPN1P18031 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 AKR1C7P-201ENST00000305623 895 ntBASIC18.85■□□□□ 0.61
PTPN1P18031 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTPN1P18031 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 COX5BP2-201ENST00000392354 334 ntBASIC18.85■□□□□ 0.61
PTPN1P18031 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN1P18031 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN1P18031 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN1P18031 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN1P18031 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.85■□□□□ 0.61
PTPN1P18031 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN1P18031 AC005332.8-201ENST00000622750 2735 ntBASIC18.85■□□□□ 0.61
PTPN1P18031 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN1P18031 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTPN1P18031 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN1P18031 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN1P18031 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPN1P18031 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN1P18031 FAAHP1-202ENST00000446499 1238 ntBASIC18.84■□□□□ 0.61
PTPN1P18031 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN1P18031 AC122714.2-201ENST00000502787 707 ntBASIC18.84■□□□□ 0.61
PTPN1P18031 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PTPN1P18031 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN1P18031 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN1P18031 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PTPN1P18031 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN1P18031 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN1P18031 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN1P18031 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN1P18031 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN1P18031 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.83■□□□□ 0.61
PTPN1P18031 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN1P18031 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms