Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.42■□□□□ 0.22
THBS1P07996 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.42■□□□□ 0.22
THBS1P07996 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.41■□□□□ 0.22
THBS1P07996 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.41■□□□□ 0.22
THBS1P07996 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.41■□□□□ 0.22
THBS1P07996 AL359075.1-203ENST00000462729 1002 ntBASIC16.41■□□□□ 0.22
THBS1P07996 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.41■□□□□ 0.22
THBS1P07996 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.41■□□□□ 0.22
THBS1P07996 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.41■□□□□ 0.22
THBS1P07996 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.41■□□□□ 0.22
THBS1P07996 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.41■□□□□ 0.22
THBS1P07996 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
THBS1P07996 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
THBS1P07996 AL023806.1-201ENST00000603994 1649 ntBASIC16.41■□□□□ 0.22
THBS1P07996 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
THBS1P07996 REXO1L11P-201ENST00000620964 1927 ntBASIC16.41■□□□□ 0.22
THBS1P07996 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THBS1P07996 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 AC139713.2-201ENST00000641328 2723 ntBASIC16.4■□□□□ 0.22
THBS1P07996 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
THBS1P07996 BX276092.7-203ENST00000637198 1536 ntBASIC16.4■□□□□ 0.22
THBS1P07996 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
THBS1P07996 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 PP12613-201ENST00000424958 2230 ntBASIC16.4■□□□□ 0.22
THBS1P07996 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 AC112907.2-201ENST00000448639 330 ntBASIC16.4■□□□□ 0.22
THBS1P07996 AC092647.4-201ENST00000457211 535 ntBASIC16.4■□□□□ 0.22
THBS1P07996 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.4■□□□□ 0.22
THBS1P07996 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 HYMAI.1-201ENST00000620949 238 ntBASIC16.4■□□□□ 0.22
THBS1P07996 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
THBS1P07996 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.4■□□□□ 0.22
THBS1P07996 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THBS1P07996 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.39■□□□□ 0.22
THBS1P07996 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
THBS1P07996 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.39■□□□□ 0.21
THBS1P07996 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.39■□□□□ 0.21
THBS1P07996 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 AC087388.1-201ENST00000571370 1112 ntBASIC16.39■□□□□ 0.21
THBS1P07996 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.39■□□□□ 0.21
THBS1P07996 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 AC141586.5-201ENST00000624546 2050 ntBASIC16.39■□□□□ 0.21
THBS1P07996 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.39■□□□□ 0.21
THBS1P07996 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms