Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CD3DP04234 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CD3DP04234 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CD3DP04234 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CD3DP04234 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.14■□□□□ 0.01
CD3DP04234 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 AC008741.2-201ENST00000612792 3115 ntBASIC15.14■□□□□ 0.01
CD3DP04234 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 AC132938.6-201ENST00000623828 1655 ntBASIC15.14■□□□□ 0.01
CD3DP04234 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.14■□□□□ 0.01
CD3DP04234 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.14■□□□□ 0.01
CD3DP04234 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CD3DP04234 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CD3DP04234 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 KRT16P1-201ENST00000399124 1418 ntBASIC15.14■□□□□ 0.01
CD3DP04234 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.14■□□□□ 0.01
CD3DP04234 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD3DP04234 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD3DP04234 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CD3DP04234 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CD3DP04234 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
CD3DP04234 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD3DP04234 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CD3DP04234 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.13■□□□□ 0.01
CD3DP04234 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.13■□□□□ 0.01
CD3DP04234 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.13■□□□□ 0.01
CD3DP04234 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.13■□□□□ 0.01
CD3DP04234 AC060834.1-201ENST00000443027 2032 ntBASIC15.13■□□□□ 0.01
CD3DP04234 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.13■□□□□ 0.01
CD3DP04234 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.13■□□□□ 0.01
CD3DP04234 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD3DP04234 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD3DP04234 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD3DP04234 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CD3DP04234 FER1L4-210ENST00000615531 5998 ntBASIC15.13■□□□□ 0.01
CD3DP04234 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CD3DP04234 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.12■□□□□ 0.01
CD3DP04234 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.12■□□□□ 0.01
CD3DP04234 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.12■□□□□ 0.01
CD3DP04234 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
CD3DP04234 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.12■□□□□ 0.01
CD3DP04234 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.12■□□□□ 0.01
CD3DP04234 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CD3DP04234 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CD3DP04234 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD3DP04234 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms