Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE6O95741 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE6O95741 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE6O95741 SLC25A6P4-201ENST00000586535 553 ntBASIC17.5■□□□□ 0.39
CPNE6O95741 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CPNE6O95741 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE6O95741 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE6O95741 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE6O95741 AC073592.3-201ENST00000625118 1834 ntBASIC17.49■□□□□ 0.39
CPNE6O95741 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE6O95741 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE6O95741 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CPNE6O95741 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.49■□□□□ 0.39
CPNE6O95741 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE6O95741 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE6O95741 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CPNE6O95741 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE6O95741 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE6O95741 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.49■□□□□ 0.39
CPNE6O95741 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE6O95741 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE6O95741 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE6O95741 BNIP3P18-201ENST00000593976 575 ntBASIC17.49■□□□□ 0.39
CPNE6O95741 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE6O95741 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE6O95741 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CPNE6O95741 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE6O95741 ANO7L1-203ENST00000602586 1720 ntBASIC17.49■□□□□ 0.39
CPNE6O95741 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE6O95741 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE6O95741 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE6O95741 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE6O95741 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 AC099343.3-201ENST00000605834 2503 ntBASIC17.48■□□□□ 0.39
CPNE6O95741 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 AL591684.3-201ENST00000605187 298 ntBASIC17.48■□□□□ 0.39
CPNE6O95741 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE6O95741 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE6O95741 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 AL024508.2-201ENST00000607749 1894 ntBASIC17.48■□□□□ 0.39
CPNE6O95741 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE6O95741 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE6O95741 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms