Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MIR4751-201ENST00000578027 74 ntBASIC27.59■■■□□ 2.01
PCF11O94913 AC092364.2-202ENST00000597012 1073 ntBASIC27.59■■■□□ 2.01
PCF11O94913 AC008667.4-201ENST00000607370 168 ntBASIC27.59■■■□□ 2.01
PCF11O94913 MIR3687-1-201ENST00000614492 61 ntBASIC27.59■■■□□ 2.01
PCF11O94913 AC010507.1-201ENST00000633895 436 ntBASIC27.59■■■□□ 2.01
PCF11O94913 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC27.59■■■□□ 2.01
PCF11O94913 HLA-DQB1-201ENST00000374943 1656 ntBASIC27.59■■■□□ 2.01
PCF11O94913 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC27.59■■■□□ 2.01
PCF11O94913 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCF11O94913 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC27.59■■■□□ 2.01
PCF11O94913 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
PCF11O94913 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PCF11O94913 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCF11O94913 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCF11O94913 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCF11O94913 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCF11O94913 STK19B-204ENST00000512515 211 ntBASIC27.58■■■□□ 2.01
PCF11O94913 AC018845.2-201ENST00000568326 409 ntBASIC27.58■■■□□ 2.01
PCF11O94913 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
PCF11O94913 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
PCF11O94913 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27.57■■■□□ 2
PCF11O94913 AC090164.3-201ENST00000610780 2143 ntBASIC27.57■■■□□ 2
PCF11O94913 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC27.57■■■□□ 2
PCF11O94913 AC023274.1-201ENST00000418278 595 ntBASIC27.57■■■□□ 2
PCF11O94913 KRT18P2-201ENST00000447938 1258 ntBASIC27.57■■■□□ 2
PCF11O94913 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.57■■■□□ 2
PCF11O94913 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 AC002310.6-201ENST00000624451 1377 ntBASIC27.57■■■□□ 2
PCF11O94913 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC27.57■■■□□ 2
PCF11O94913 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC27.57■■■□□ 2
PCF11O94913 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCF11O94913 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC27.57■■■□□ 2
PCF11O94913 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC27.56■■■□□ 2
PCF11O94913 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.56■■■□□ 2
PCF11O94913 COX20P2-201ENST00000452636 358 ntBASIC27.56■■■□□ 2
PCF11O94913 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC27.56■■■□□ 2
PCF11O94913 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC27.56■■■□□ 2
PCF11O94913 AL020996.1-203ENST00000536896 2307 ntBASIC27.56■■■□□ 2
PCF11O94913 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC27.56■■■□□ 2
PCF11O94913 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCF11O94913 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
PCF11O94913 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC27.56■■■□□ 2
PCF11O94913 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC27.56■■■□□ 2
PCF11O94913 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.56■■■□□ 2
PCF11O94913 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC27.56■■■□□ 2
PCF11O94913 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC27.56■■■□□ 2
PCF11O94913 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
PCF11O94913 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
PCF11O94913 KRT18P28-201ENST00000453838 1332 ntBASIC27.55■■■□□ 2
PCF11O94913 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC27.55■■■□□ 2
PCF11O94913 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 GPR89P-201ENST00000407924 1495 ntBASIC27.55■■■□□ 2
PCF11O94913 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.55■■■□□ 2
PCF11O94913 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.55■■■□□ 2
PCF11O94913 HCG4B-203ENST00000450128 991 ntBASIC27.55■■■□□ 2
PCF11O94913 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
PCF11O94913 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.55■■■□□ 2
PCF11O94913 AC010654.1-201ENST00000615722 808 ntBASIC27.55■■■□□ 2
PCF11O94913 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC27.55■■■□□ 2
PCF11O94913 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.55■■■□□ 2
PCF11O94913 FLJ13224-201ENST00000313737 1514 ntBASIC27.55■■■□□ 2
PCF11O94913 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
PCF11O94913 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
PCF11O94913 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC27.54■■■□□ 2
PCF11O94913 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
PCF11O94913 STK4-201ENST00000372801 2038 ntTSL 2 BASIC27.54■■■□□ 2
PCF11O94913 REXO1L11P-201ENST00000620964 1927 ntBASIC27.54■■■□□ 2
PCF11O94913 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
PCF11O94913 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC27.54■■■□□ 2
PCF11O94913 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC27.54■■■□□ 2
PCF11O94913 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PCF11O94913 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.54■■■□□ 2
PCF11O94913 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
PCF11O94913 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
PCF11O94913 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC27.54■■■□□ 2
PCF11O94913 IGHV3-65-201ENST00000523210 341 ntBASIC27.54■■■□□ 2
PCF11O94913 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.54■■■□□ 2
PCF11O94913 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.54■■■□□ 2
PCF11O94913 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC27.54■■■□□ 2
PCF11O94913 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
PCF11O94913 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC27.54■■■□□ 2
PCF11O94913 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms