Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE3O75131 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CPNE3O75131 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE3O75131 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 LINC01126-201ENST00000623515 1646 ntBASIC17.11■□□□□ 0.33
CPNE3O75131 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 AC104581.1-202ENST00000635932 2618 ntBASIC17.11■□□□□ 0.33
CPNE3O75131 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 AC139713.2-201ENST00000641328 2723 ntBASIC17.11■□□□□ 0.33
CPNE3O75131 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CPNE3O75131 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CPNE3O75131 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 KRT18P65-201ENST00000439811 1286 ntBASIC17.11■□□□□ 0.33
CPNE3O75131 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.11■□□□□ 0.33
CPNE3O75131 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.11■□□□□ 0.33
CPNE3O75131 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE3O75131 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE3O75131 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CPNE3O75131 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPNE3O75131 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE3O75131 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CPNE3O75131 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE3O75131 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.1■□□□□ 0.33
CPNE3O75131 MTCL1P1-201ENST00000446207 792 ntBASIC17.1■□□□□ 0.33
CPNE3O75131 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.1■□□□□ 0.33
CPNE3O75131 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE3O75131 MIR5100-201ENST00000579544 119 ntBASIC17.1■□□□□ 0.33
CPNE3O75131 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
CPNE3O75131 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE3O75131 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPNE3O75131 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE3O75131 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CPNE3O75131 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CPNE3O75131 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE3O75131 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 AC099398.1-201ENST00000567919 2776 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms