Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 NOC2LP1-202ENST00000452600 2235 ntBASIC17.67■□□□□ 0.42
PCDHGA12O60330 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 MIR940-201ENST00000401276 94 ntBASIC17.67■□□□□ 0.42
PCDHGA12O60330 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 AC083906.6-201ENST00000641366 219 ntBASIC17.67■□□□□ 0.42
PCDHGA12O60330 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 AC125634.1-201ENST00000438758 1403 ntBASIC17.66■□□□□ 0.42
PCDHGA12O60330 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 ABCD1P5-201ENST00000445663 754 ntBASIC17.66■□□□□ 0.42
PCDHGA12O60330 IGHV3-22-201ENST00000520721 359 ntBASIC17.66■□□□□ 0.42
PCDHGA12O60330 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 AC021087.4-201ENST00000563761 564 ntBASIC17.66■□□□□ 0.42
PCDHGA12O60330 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 NOC2LP2-201ENST00000407594 1944 ntBASIC17.66■□□□□ 0.42
PCDHGA12O60330 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA12O60330 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA12O60330 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA12O60330 AL024508.2-201ENST00000607749 1894 ntBASIC17.65■□□□□ 0.42
PCDHGA12O60330 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA12O60330 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA12O60330 AC027601.4-201ENST00000611259 610 ntBASIC17.65■□□□□ 0.42
PCDHGA12O60330 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA12O60330 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.65■□□□□ 0.42
PCDHGA12O60330 SDHAP2-201ENST00000455183 2001 ntBASIC17.65■□□□□ 0.42
PCDHGA12O60330 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGA12O60330 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA12O60330 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA12O60330 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PCDHGA12O60330 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA12O60330 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA12O60330 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA12O60330 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHGA12O60330 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA12O60330 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA12O60330 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA12O60330 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGA12O60330 PGAM5P1-201ENST00000518923 814 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms