Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 AL121772.3-201ENST00000610840 674 ntBASIC17.1■□□□□ 0.33
PRICKLE3O43900 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE3O43900 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRICKLE3O43900 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AC007613.1-201ENST00000572811 2597 ntBASIC17.09■□□□□ 0.33
PRICKLE3O43900 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 FAM220CP-201ENST00000395253 831 ntBASIC17.09■□□□□ 0.33
PRICKLE3O43900 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 UNC93B7-201ENST00000509439 705 ntBASIC17.09■□□□□ 0.33
PRICKLE3O43900 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AL732292.2-201ENST00000609649 430 ntBASIC17.09■□□□□ 0.33
PRICKLE3O43900 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE3O43900 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE3O43900 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRICKLE3O43900 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.08■□□□□ 0.33
PRICKLE3O43900 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.08■□□□□ 0.33
PRICKLE3O43900 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.08■□□□□ 0.33
PRICKLE3O43900 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.08■□□□□ 0.33
PRICKLE3O43900 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRICKLE3O43900 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRICKLE3O43900 NOC2LP2-201ENST00000407594 1944 ntBASIC17.08■□□□□ 0.33
PRICKLE3O43900 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.08■□□□□ 0.33
PRICKLE3O43900 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PRICKLE3O43900 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 NUS1P2-201ENST00000417358 873 ntBASIC17.08■□□□□ 0.32
PRICKLE3O43900 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRICKLE3O43900 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE3O43900 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms