Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2AO43633 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 AL390961.4-201ENST00000623958 2535 ntBASIC20.05■□□□□ 0.8
CHMP2AO43633 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP2AO43633 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2AO43633 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMP2AO43633 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMP2AO43633 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMP2AO43633 AC009533.2-201ENST00000543664 586 ntBASIC20.05■□□□□ 0.8
CHMP2AO43633 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMP2AO43633 RN7SL510P-201ENST00000581311 263 ntBASIC20.05■□□□□ 0.8
CHMP2AO43633 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2AO43633 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2AO43633 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMP2AO43633 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2AO43633 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP2AO43633 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2AO43633 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP2AO43633 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP2AO43633 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP2AO43633 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP2AO43633 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP2AO43633 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.04■□□□□ 0.8
CHMP2AO43633 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
CHMP2AO43633 POM121L3P-201ENST00000419331 1163 ntBASIC20.04■□□□□ 0.8
CHMP2AO43633 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP2AO43633 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMP2AO43633 MIR5100-201ENST00000579544 119 ntBASIC20.04■□□□□ 0.8
CHMP2AO43633 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.04■□□□□ 0.8
CHMP2AO43633 AL591684.3-201ENST00000605187 298 ntBASIC20.04■□□□□ 0.8
CHMP2AO43633 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP2AO43633 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMP2AO43633 AC009949.1-201ENST00000623048 1830 ntBASIC20.04■□□□□ 0.8
CHMP2AO43633 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2AO43633 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2AO43633 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2AO43633 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC007967.3-201ENST00000434308 558 ntBASIC20.03■□□□□ 0.8
CHMP2AO43633 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2AO43633 KRT16P4-201ENST00000453883 522 ntBASIC20.03■□□□□ 0.8
CHMP2AO43633 EMBP1-201ENST00000458200 901 ntBASIC20.03■□□□□ 0.8
CHMP2AO43633 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.03■□□□□ 0.8
CHMP2AO43633 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.03■□□□□ 0.8
CHMP2AO43633 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2AO43633 LINC01711-201ENST00000598340 967 ntBASIC20.03■□□□□ 0.8
CHMP2AO43633 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.03■□□□□ 0.8
CHMP2AO43633 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2AO43633 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2AO43633 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms