Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
RRP8O43159 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RRP8O43159 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.7■□□□□ 0.26
RRP8O43159 AC141586.3-201ENST00000562166 1838 ntBASIC16.7■□□□□ 0.26
RRP8O43159 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.7■□□□□ 0.26
RRP8O43159 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.7■□□□□ 0.26
RRP8O43159 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.7■□□□□ 0.26
RRP8O43159 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
RRP8O43159 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 ACTG1P14-201ENST00000446382 1122 ntBASIC16.7■□□□□ 0.26
RRP8O43159 AP000344.2-201ENST00000512987 629 ntBASIC16.7■□□□□ 0.26
RRP8O43159 AC018845.2-201ENST00000568326 409 ntBASIC16.7■□□□□ 0.26
RRP8O43159 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.7■□□□□ 0.26
RRP8O43159 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
RRP8O43159 AC073592.4-201ENST00000623827 446 ntBASIC16.7■□□□□ 0.26
RRP8O43159 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.7■□□□□ 0.26
RRP8O43159 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
RRP8O43159 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.7■□□□□ 0.26
RRP8O43159 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RRP8O43159 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.7■□□□□ 0.26
RRP8O43159 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.69■□□□□ 0.26
RRP8O43159 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 MTMR9LP-203ENST00000426597 1545 ntBASIC16.69■□□□□ 0.26
RRP8O43159 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
RRP8O43159 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.69■□□□□ 0.26
RRP8O43159 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RRP8O43159 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.68■□□□□ 0.26
RRP8O43159 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.68■□□□□ 0.26
RRP8O43159 PMPCAP1-201ENST00000508114 1576 ntBASIC16.68■□□□□ 0.26
RRP8O43159 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.68■□□□□ 0.26
RRP8O43159 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.68■□□□□ 0.26
RRP8O43159 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RRP8O43159 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.68■□□□□ 0.26
RRP8O43159 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RRP8O43159 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.68■□□□□ 0.26
RRP8O43159 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RRP8O43159 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
RRP8O43159 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.68■□□□□ 0.26
RRP8O43159 AC025678.2-201ENST00000562061 970 ntBASIC16.68■□□□□ 0.26
RRP8O43159 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.68■□□□□ 0.26
RRP8O43159 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.68■□□□□ 0.26
RRP8O43159 AC093512.1-201ENST00000617969 520 ntBASIC16.68■□□□□ 0.26
RRP8O43159 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms