Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
IGHV4-28A0A0C4DH34 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 TP73-AS1-210ENST00000637775 1455 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC009533.2-201ENST00000543664 586 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 REXO1L9P-201ENST00000604264 2108 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AL591684.3-201ENST00000605187 298 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AL138831.2-201ENST00000606564 490 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC125634.1-201ENST00000438758 1403 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC009113.1-201ENST00000570267 2443 ntBASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
IGHV4-28A0A0C4DH34 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms