Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV9-2A0A087WT02 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV9-2A0A087WT02 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV9-2A0A087WT02 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV9-2A0A087WT02 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV9-2A0A087WT02 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
TRAV9-2A0A087WT02 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TRAV9-2A0A087WT02 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV9-2A0A087WT02 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 RPS2P55-201ENST00000397318 883 ntBASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 AC107956.1-201ENST00000494359 873 ntBASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 HTR7P1-201ENST00000538670 1336 ntBASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 FEM1AP3-201ENST00000403722 1741 ntBASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV9-2A0A087WT02 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms