Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 MIR3917-201ENST00000580971 93 ntBASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 AC138932.1-201ENST00000534164 6830 ntBASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN6Q9Y6Q1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CAPN6Q9Y6Q1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 MIR1238-201ENST00000408483 83 ntBASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN6Q9Y6Q1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 AC060834.1-201ENST00000443027 2032 ntBASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN6Q9Y6Q1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN6Q9Y6Q1 TSPY14P-201ENST00000303979 915 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms