Protein–RNA interactions for Protein: Q9Y5J5

PHLDA3, Pleckstrin homology-like domain family A member 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3Q9Y5J5 CD177P1-201ENST00000606252 935 ntBASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHLDA3Q9Y5J5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 HOXB1-202ENST00000577092 1414 ntBASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 MESTP1-201ENST00000404287 994 ntBASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.22□□□□□ -0.29
PHLDA3Q9Y5J5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 PCDHA12-202ENST00000613593 2588 ntBASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHLDA3Q9Y5J5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHLDA3Q9Y5J5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms