Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 LINC00896-202ENST00000609602 2128 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 KRT16P4-201ENST00000453883 522 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AP002469.2-201ENST00000531724 424 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AL121912.1-201ENST00000603683 238 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 AL357033.4-201ENST00000617703 1807 ntBASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA6Q9Y5G7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA6Q9Y5G7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 NSUN5P1-202ENST00000421140 1535 ntBASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 NSUN5P2-203ENST00000457352 1529 ntBASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA6Q9Y5G7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AC134043.2-201ENST00000624206 2238 ntBASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms