Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 AL023875.1-201ENST00000640777 796 ntBASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB1Q9Y5G3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGB1Q9Y5G3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 AL353807.1-201ENST00000427475 662 ntBASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 AC133681.1-201ENST00000465482 601 ntBASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 AC110285.5-201ENST00000611501 352 ntBASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 AC011298.2-201ENST00000617989 482 ntBASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 AL031985.4-201ENST00000642138 673 ntBASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB1Q9Y5G3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms