Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
AP4S1Q9Y587 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.3
AP4S1Q9Y587 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
AP4S1Q9Y587 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.89■□□□□ 0.3
AP4S1Q9Y587 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4S1Q9Y587 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.88■□□□□ 0.29
AP4S1Q9Y587 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 KRT16P5-201ENST00000455284 522 ntBASIC16.88■□□□□ 0.29
AP4S1Q9Y587 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 AC022517.1-201ENST00000592429 346 ntBASIC16.88■□□□□ 0.29
AP4S1Q9Y587 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 GPAT2P1-201ENST00000444924 1672 ntBASIC16.88■□□□□ 0.29
AP4S1Q9Y587 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4S1Q9Y587 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 NFIC-211ENST00000641145 8399 ntBASIC16.87■□□□□ 0.29
AP4S1Q9Y587 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.87■□□□□ 0.29
AP4S1Q9Y587 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms