Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FCF1Q9Y324 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.08■□□□□ 0.49
FCF1Q9Y324 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
FCF1Q9Y324 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.08■□□□□ 0.49
FCF1Q9Y324 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
FCF1Q9Y324 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.08■□□□□ 0.49
FCF1Q9Y324 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FCF1Q9Y324 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 AC096633.1-201ENST00000422446 749 ntBASIC18.08■□□□□ 0.48
FCF1Q9Y324 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 EMBP1-201ENST00000458200 901 ntBASIC18.08■□□□□ 0.48
FCF1Q9Y324 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 LINC01711-201ENST00000598340 967 ntBASIC18.08■□□□□ 0.48
FCF1Q9Y324 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FCF1Q9Y324 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
FCF1Q9Y324 INTS4P1-201ENST00000438455 1935 ntBASIC18.08■□□□□ 0.48
FCF1Q9Y324 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 AKR1C7P-201ENST00000305623 895 ntBASIC18.07■□□□□ 0.48
FCF1Q9Y324 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FCF1Q9Y324 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FCF1Q9Y324 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.06■□□□□ 0.48
FCF1Q9Y324 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
FCF1Q9Y324 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
FCF1Q9Y324 AC007613.1-201ENST00000572811 2597 ntBASIC18.06■□□□□ 0.48
FCF1Q9Y324 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 AC097374.2-201ENST00000618617 1306 ntBASIC18.06■□□□□ 0.48
FCF1Q9Y324 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FCF1Q9Y324 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms