Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ABHD17AP1-201ENST00000358206 933 ntBASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH1Q9Y2L9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH1Q9Y2L9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 LYSMD4-203ENST00000378904 2122 ntBASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms