Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF6Q9Y252 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF6Q9Y252 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF6Q9Y252 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.83■□□□□ 0.29
RNF6Q9Y252 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 MYLKP1-201ENST00000509077 1580 ntBASIC16.83■□□□□ 0.28
RNF6Q9Y252 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF6Q9Y252 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF6Q9Y252 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 KRT8P3-201ENST00000519669 1449 ntBASIC16.82■□□□□ 0.28
RNF6Q9Y252 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 SPDYE15P-201ENST00000424157 909 ntBASIC16.82■□□□□ 0.28
RNF6Q9Y252 AL450487.1-201ENST00000426799 995 ntBASIC16.82■□□□□ 0.28
RNF6Q9Y252 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CLEC4GP1-201ENST00000596555 870 ntBASIC16.82■□□□□ 0.28
RNF6Q9Y252 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CR769767.2-201ENST00000622735 460 ntBASIC16.82■□□□□ 0.28
RNF6Q9Y252 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF6Q9Y252 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 AL096828.2-201ENST00000567259 1965 ntBASIC16.82■□□□□ 0.28
RNF6Q9Y252 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RNF6Q9Y252 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.81■□□□□ 0.28
RNF6Q9Y252 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.81■□□□□ 0.28
RNF6Q9Y252 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms