Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 AC135050.7-201ENST00000624508 2218 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 BX276092.7-203ENST00000637198 1536 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 AL354751.1-201ENST00000412768 1863 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 FGFR3P6-201ENST00000457012 610 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 AC009078.2-202ENST00000463353 338 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 TP73-AS1-207ENST00000624167 988 ntBASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.1■□□□□ 0.65
UBQLN1Q9UMX0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 AP000867.4-201ENST00000641616 219 ntBASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN1Q9UMX0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBQLN1Q9UMX0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.08■□□□□ 0.65
UBQLN1Q9UMX0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBQLN1Q9UMX0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.08■□□□□ 0.65
UBQLN1Q9UMX0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.08■□□□□ 0.65
UBQLN1Q9UMX0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBQLN1Q9UMX0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 SCARNA2-201ENST00000458748 420 ntBASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 AL662844.1-201ENST00000546340 181 ntBASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 AD001527.2-201ENST00000622994 785 ntBASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms