Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL20A1Q9P218 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.11■□□□□ 0.81
COL20A1Q9P218 AC106730.1-201ENST00000566722 1090 ntBASIC20.11■□□□□ 0.81
COL20A1Q9P218 AC008735.5-201ENST00000623544 497 ntBASIC20.11■□□□□ 0.81
COL20A1Q9P218 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL20A1Q9P218 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.11■□□□□ 0.81
COL20A1Q9P218 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL20A1Q9P218 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL20A1Q9P218 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL20A1Q9P218 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.11■□□□□ 0.81
COL20A1Q9P218 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL20A1Q9P218 AP002414.3-201ENST00000589352 1468 ntBASIC20.11■□□□□ 0.81
COL20A1Q9P218 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL20A1Q9P218 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL20A1Q9P218 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.11■□□□□ 0.81
COL20A1Q9P218 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 AC098831.1-202ENST00000438821 336 ntBASIC20.1■□□□□ 0.81
COL20A1Q9P218 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 AC092910.1-201ENST00000482027 1129 ntBASIC20.1■□□□□ 0.81
COL20A1Q9P218 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 AL022326.1-202ENST00000641533 845 ntBASIC20.1■□□□□ 0.81
COL20A1Q9P218 FLJ13224-201ENST00000313737 1514 ntBASIC20.1■□□□□ 0.81
COL20A1Q9P218 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL20A1Q9P218 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL20A1Q9P218 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 KRT18P55-202ENST00000578578 1546 ntBASIC20.09■□□□□ 0.81
COL20A1Q9P218 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 DDX43P3-201ENST00000441064 443 ntBASIC20.09■□□□□ 0.81
COL20A1Q9P218 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 HLA-J-201ENST00000462773 1622 ntBASIC20.09■□□□□ 0.81
COL20A1Q9P218 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.09■□□□□ 0.81
COL20A1Q9P218 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL20A1Q9P218 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 RPS2P28-201ENST00000314255 741 ntBASIC20.08■□□□□ 0.81
COL20A1Q9P218 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL20A1Q9P218 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 AC109462.3-201ENST00000573934 613 ntBASIC20.08■□□□□ 0.81
COL20A1Q9P218 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.08■□□□□ 0.81
COL20A1Q9P218 AC023511.2-201ENST00000618803 211 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms